BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G08LP1|AL426096
(599 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1070 1128 0.0
>3x_Contig1070
Length = 4775
Score = 1128 bits (568), Expect = 0.0
Identities = 592/599 (98%), Gaps = 3/599 (0%)
Strand = Plus / Minus
Query: 1 cttcgtttggcttttgtgggaataatttatcaataaaaaatcgctttgtaaagtattata 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1060 cttcgtttggcttttgtgggaataatttatcaataataaatcgctttgtaaagtattata 1001
Query: 61 ataatgctcacgaacacggtcttgatgtgtaacaacaggcttgaatgctggagatctaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ataatgctcacgaacacggtcttgatgtgtaacaacaggcttgaatgctggagatctaat 941
Query: 121 atcgtttttactatatttcaattcaggaaaccttggggatagcttgctcttgtcgatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 atcgtttttactatatttcaattcaggaaaccttggggatagcttgctcttgtcgatctt 881
Query: 181 aaccaaatgatgcactggcttaaccaaagcacaagcagctttggagacctttgtaatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 880 aaccaaatgatgcactggcttaaccaaagcacaagcagctttggagacctttgaa--cta 823
Query: 241 ctgtggaaaccacgtaccacttgcattatcacttgtgtatcttctcacagatgcgaacga 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 822 ctgtggaaaccacgtaccacttgcattatcacttg-gtatcttctcacagatgcgaacga 764
Query: 301 atgaatgtataaacctacgaatgggaaggaatactgctttaaatcgagtgaaactgatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 atgaatgtataaacctacgaatgggaaggaatactgctttaaatcgagtgaaactgatca 704
Query: 361 aatctctatcattatcttacagctttagctcgaaaggtcgaaaaatttttaaaactttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aatctctatcattatcttacagctttagctcgaaaggtcgaaaaatttttaaaactttca 644
Query: 421 agtacagagaattcaatatacgtcacgtgacaagaatcaacaaaaagtgaaatttgatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agtacagagaattcaatatacgtcacgtgacaagaatcaacaaaaagtgaaatttgatta 584
Query: 481 amaaccaggtagagctcagttgatgattatagagagtgttgacctttcagcccttgtgtt 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaaaccaggtagagctcagttgatgattatagagagtgttgacctttcagcccttgtgtt 524
Query: 541 gatgcattgcakccgtttttttttgatcccgtacttaaagacacgtagctggattctcc 599
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gatgcattgcagccgtttttttttgatcccgtacttaaagacacgtagctggattctcc 465
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4707
Number of Sequences: 1807
Number of extensions: 4707
Number of successful extensions: 125
Number of sequences better than 1.0e-20: 1
length of query: 599
length of database: 10,358,551
effective HSP length: 16
effective length of query: 583
effective length of database: 10,329,639
effective search space: 6022179537
effective search space used: 6022179537
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)